TAP CCAAT_HAP2 (NF-YA) in Panicum virgatum

Full lineage¹: cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum; Panicum sect. Hiantes

Protein source: Phytozome (proteins from primary transcripts)


The colour code corresponds to the rules for the domains:

should be contained
should not be contained

Domain rules

CBFB_NFYA
bZIP_1
bZIP_2

(Domain names are clickable)



List of proteins (18)

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namename additionClick button to show/hide sequence: Download sequence?
Pavir.Aa00318.1.ppacid=30252061 transcript=Pavir.Aa00318.1 locus=Pavir.Aa00318 ID=Pavir.Aa00318.1.v1.1 annot-version=v1.1
Pavir.Ba00442.1.ppacid=30292561 transcript=Pavir.Ba00442.1 locus=Pavir.Ba00442 ID=Pavir.Ba00442.1.v1.1 annot-version=v1.1
Pavir.Ba03783.1.ppacid=30293006 transcript=Pavir.Ba03783.1 locus=Pavir.Ba03783 ID=Pavir.Ba03783.1.v1.1 annot-version=v1.1
Pavir.Bb00319.1.ppacid=30299634 transcript=Pavir.Bb00319.1 locus=Pavir.Bb00319 ID=Pavir.Bb00319.1.v1.1 annot-version=v1.1
Pavir.Ca02834.1.ppacid=30206488 transcript=Pavir.Ca02834.1 locus=Pavir.Ca02834 ID=Pavir.Ca02834.1.v1.1 annot-version=v1.1
Pavir.Cb00052.1.ppacid=30267490 transcript=Pavir.Cb00052.1 locus=Pavir.Cb00052 ID=Pavir.Cb00052.1.v1.1 annot-version=v1.1
Pavir.Ia00780.1.ppacid=30209211 transcript=Pavir.Ia00780.1 locus=Pavir.Ia00780 ID=Pavir.Ia00780.1.v1.1 annot-version=v1.1
Pavir.Ia01146.1.ppacid=30213844 transcript=Pavir.Ia01146.1 locus=Pavir.Ia01146 ID=Pavir.Ia01146.1.v1.1 annot-version=v1.1
Pavir.Ia04345.1.ppacid=30211821 transcript=Pavir.Ia04345.1 locus=Pavir.Ia04345 ID=Pavir.Ia04345.1.v1.1 annot-version=v1.1
Pavir.Ib00471.1.ppacid=30240928 transcript=Pavir.Ib00471.1 locus=Pavir.Ib00471 ID=Pavir.Ib00471.1.v1.1 annot-version=v1.1
Pavir.Ib01915.1.ppacid=30237493 transcript=Pavir.Ib01915.1 locus=Pavir.Ib01915 ID=Pavir.Ib01915.1.v1.1 annot-version=v1.1
Pavir.Ib04124.1.ppacid=30236953 transcript=Pavir.Ib04124.1 locus=Pavir.Ib04124 ID=Pavir.Ib04124.1.v1.1 annot-version=v1.1
Pavir.J00945.1.ppacid=30220734 transcript=Pavir.J00945.1 locus=Pavir.J00945 ID=Pavir.J00945.1.v1.1 annot-version=v1.1
Pavir.J05826.1.ppacid=30315207 transcript=Pavir.J05826.1 locus=Pavir.J05826 ID=Pavir.J05826.1.v1.1 annot-version=v1.1
Pavir.J06031.1.ppacid=30283744 transcript=Pavir.J06031.1 locus=Pavir.J06031 ID=Pavir.J06031.1.v1.1 annot-version=v1.1
Pavir.J06649.1.ppacid=30315564 transcript=Pavir.J06649.1 locus=Pavir.J06649 ID=Pavir.J06649.1.v1.1 annot-version=v1.1
Pavir.J08102.1.ppacid=30263375 transcript=Pavir.J08102.1 locus=Pavir.J08102 ID=Pavir.J08102.1.v1.1 annot-version=v1.1
Pavir.J24924.1.ppacid=30196073 transcript=Pavir.J24924.1 locus=Pavir.J24924 ID=Pavir.J24924.1.v1.1 annot-version=v1.1
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A list of species letter codes included in the protein names can be found here (opens in new tab).

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¹ Information recieved using NCBI E-utilities and NCBI taxonomy database.
Impressum